A reference panel of 64976 haplotypes for genotype imputation

A reference panel of 64,976 haplotypes for genotype imputation. Overview of attention for article published in Nature Genetics, August 2016.

The size and composition of haplotype reference panels impact the ...

Low-pass sequencing followed by sequence variant genotype imputation is an alternative to the routine microarray-based genotyping in cattle.

Nature Genetics on X: "Reference panel of 64,976 haplotypes for ...

Reference panel of 64976 haplotypes for genotype imputation (McCarthy et al) https://t.co/4IQNH201e6.

Haplotype reference consortium panel: Practical implications of ...

In this study, we compared a set of directly assayed common and rare variants from an exome array to imputed genotypes, that is, 1000 genomes ...

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Document is current. Any future updates will be listed below. A reference panel of 64,976 haplotypes for genotype imputation.

A One-Penny Imputed Genome from Next-Generation Reference ...

12. McCarthy, S. ∙ Das, S. ∙ Kretzschmar, W. ..., Haplotype Reference Consortium. A reference panel of 64,976 haplotypes for genotype imputation. Nat. Genet ...

Publications - jmarchini - Jonathan Marchini

The Haplotype Reference Consortium. A reference panel of 64,976 haplotypes for genotype imputation. Nature Genetics 10.1038/ng.3643 [Journal]. Victoria Hore ...

A Genomics England haplotype reference panel and the imputation ...

et al. A reference panel of 64,976 haplotypes for genotype imputation. Nat. Genet . 48, 1279–1283 ...

HRC (Version r1.1 2016) reference panel November 2021

The HRC reference panel contains 64,976 haplotypes and 39,235,157 sites ... Accurate imputation is dependent upon the study and reference panel allele calls being.

Reference Panels - Michigan Imputation Server - Read the Docs

Genotype Imputation; Reference Panels; Edit on genepi/imputationserver ... This HRC panel consists of 64,976 haplotypes of predominantly European ancestry.

The Haplotype Reference Consortium - EGA European Genome ...

A reference panel of 64,976 haplotypes for genotype imputation. McCarthy S, Das S, Kretzschmar W, Delaneau O, Wood AR, Teumer A, Kang HM, Fuchsberger C ...

high-resolution haplotype-resolved Reference panel constructed ...

... haplotype reference panel for genotype imputation. In this study, we used ... K. A reference panel of 64,976 haplotypes for genotype imputation . Nat ...

Rapid, Reference-Free human genotype imputation with denoising ...

The hidden states in the HMMs represent the haplotype in a reference panel that is most closely related to the haplotype being imputed. The HMM ...

Meta-imputation: An efficient method to combine genotype data after ...

7. McCarthy, S. ∙ Das, S. ∙ Kretzschmar, W. ... A reference panel of 64,976 haplotypes for genotype imputation. Nat. Genet. 2016; 48:1279 ...

SNP-HLA Reference Consortium (SHLARC) - HAL

Haplotype Reference Consortium. (2016). A reference panel of 64,976 haplotypes for genotype imputation. Nature Genetics, 48(10), 1279–1283.

Genotype Imputation from Large Reference Panels

... the reference panel generally increases imputation accuracy ... A reference panel of 64,976 haplotypes for genotype imputation. Nat ...

A population-specific reference panel for improved genotype ... - OUCI

The Haplotype Reference Consortium. A reference panel of 64,976 haplotypes for genotype imputation. Nat. Genet. 48, 1279–1283 (2016). https://doi.org ...

Overcoming the challenges of imputation of rare variants in a ...

A reference panel of 64,976 haplotypes for genotype imputation. Nat Genet ... Genotype imputation for Han Chinese population using Haplotype Reference Consortium ...

Accuracy of Imputation for Apolipoprotein E ε Alleles in Genome ...

4. McCarthy S, Das S, Kretzschmar W, et al; Haplotype Reference Consortium. A reference panel of 64,976 haplotypes for genotype imputation.

Opening the Black Box of Imputation Software to Study the Impact of ...

Genotype imputation is widely used to enrich genetic datasets. The operation relies on panels of known reference haplotypes, typically with ...