- The polarity|induced force imbalance in Caenorhabditis elegans ...🔍
- Dynamic patterning of maternal mRNAs in the Early C. elegans ...🔍
- Priya Sivaramakrishnan🔍
- DNA replication origins during embryogenesis in C. elegans.🔍
- Caenorhabditis elegans🔍
- Sivaramakrishnan Laboratory Publications🔍
- A spatial and temporal map of C. elegans gene expression🔍
- Transcriptomic analysis of the spatiotemporal axis of oogenesis and ...🔍
Transcript accumulation rates in the early Caenorhabditis elegans ...
The polarity-induced force imbalance in Caenorhabditis elegans ...
Transcript accumulation rates in the early Caenorhabditis elegans embryo. Priya Sivaramakrishnan, Sci Adv, 2023. Prognostic significance of ...
Dynamic patterning of maternal mRNAs in the Early C. elegans ...
In contrast, the degradation of pie-1 mRNAs in one somatic lineage, AB, takes place at a rate slower than that of the other lineages, leading to an accumulation ...
Priya Sivaramakrishnan | Faculty | About Us
Sivaramakrishnan, P., Watkins, C., Murray, J.I.: Transcript accumulation rates in the early Caenorhabditis elegans embryo. Science Advances 9(eadi1270) ...
DNA replication origins during embryogenesis in C. elegans. - eLife
transcription in pre-gastrula early embryos 12-14. 128. 129. 130. Coupling of DNA replication with gene enhancers within rapidly dividing embryonic cells likely.
Caenorhabditis elegans - public RNASeq studies
European Molecular Biology Laboratory. To assess the performance of computational methods for exon identification, transcript reconstruction and expression ...
Sivaramakrishnan Laboratory Publications | CHOP Research Institute
Below is a list of selected publications from the Sivaramakrishnan Lab. Transcript accumulation rates in the early Caenorhabditis elegans embryo. Sci Adv ...
A spatial and temporal map of C. elegans gene expression
discovery rates (FDRs) to limit the potential accumulation of false- ... transcript levels in the germline. The mir-58 and mir-51 motifs were previously ...
Transcriptomic analysis of the spatiotemporal axis of oogenesis and ...
Composition and dynamics of the Caenorhabditis elegans early embryonic transcriptome. ... elegans germline through regulation of GLD-1 protein accumulation.
Composition and dynamics of theCaenorhabditis elegans ... - OUCI
Temporal profiles of transcript abundance during embryonic development were obtained by whole-genome expression analysis from precisely staged C. elegans ...
Chromatin Organization during C. elegans Early Development - MDPI
Active histone modifications are generally associated with chromatin that have a higher rate of transcription, and conversely repressive histone modifications ...
Caenorhabditis elegans ETR-1/CELF has broad effects on the ...
We used stringTie and DEseq2 to identify transcripts with differential accumulation in wild-type versus etr-1(lq61) muscle cells (see Materials ...
mRNA localization is linked to translation regulation ... - HAL-Pasteur
Caenorhabditis elegans early embryos generate cell-specific ... consequence that befalls transcripts experiencing low rates of translation ...
Two distinct transcription termination modes dictated by promoters
polymerase II (Pol II) transcription termination in XRN2-deficient Caenorhabditis elegans and observed two dis- ... transcription elongation rates through the ...
Mutational and transcriptional landscape of spontaneous gene ...
(2017) Mitochondrial mutation rate, spectrum and heteroplasmy in. Caenorhabditis elegans spontaneous mutation accumulation lines of differing ...
Nutritional Control of Development During Caenorhabditis elegans ...
Given the ancient and pervasive effects of nutrient availability, it impacts or- ganismal biology broadly. For example, growth rate and stress resistance are ...
C. elegans molting requires rhythmic accumulation of ... - EMBO Press
To uncover the responsible gene regulatory networks (GRNs), we screened for transcription factors that promote progression through the larval stages and ...
Transcriptome age of individual cell types in Caenorhabditis elegans
The variation in transcriptome ages among individual cell types remained small in early and midembryonic development and grew bigger in late ...
Maternal H3K36 and H3K27 HMTs protect germline development ...
We identified only eight upregulated X genes, which may explain why most met-1 worms are fertile when reared at normal growth temperature (20°C) ...
Heat shock in C. elegans induces downstream of gene transcription ...
We find a subset of both sense and antisense transcripts enriched in the dsRNA pool by heat shock overlap with dsRNA transcripts enriched by ...
Downregulation of transposable elements extends lifespan in ...
elegans contains 31 Tc1 (transposon C. elegans number 1) and 22 Tc3 DNA transposon stretches, which are the most mobile TEs in this organism.