Bioinformatics Analysis of Long Non|coding RNA and Related ...

Expression characteristics of long non-coding RNA in colon ...

... bioinformatics analysis based on The Cancer Genome Atlas database. ... Downloading COAD-related RNA-seq data from TCGA for analysis of lncRNA ...

Bioinformatics analysis and identification of cuproptosis-related long ...

Here, we developed an innovative prognostic model for CRC using cuproptosis-related long non-coding RNAs (lncRNAs).

Decoding the Non-coding: Tools and Databases Unveiling the ...

LncSEA: A Platform for Long Non-Coding RNA Related Sets and Enrichment Analysis. Nucleic Acids Res. 2021, 49 (D1), D969– D980, DOI: 10.1093 ...

Bioinformatics analysis for the identification of key genes and long ...

Bioinformatics analysis for the identification of key genes and long non-coding RNAs related to bone metastasis in breast cancer. Xu Teng , Tianshu Yang ...

Excavating novel diagnostic and prognostic long non-coding RNAs ...

We present a comprehensive bioinformatics analysis in which competing endogenous RNA (ceRNA) network construction and weighted gene co-expression network ...

LncRNA Sequencing - CD Genomics

... bioinformatics analysis. The Introduction of LncRNA Sequencing. Long non-coding RNAs (lncRNAs) are defined as a large ... related to protein ...

Non-Coding RNAs and their Integrated Networks - De Gruyter

RNA sequencing technologies and bioinformatics methods greatly promoted the study ... large-scale sequencing and computational analysis ...

Diagnosis, prognosis and bioinformatics analysis of lncRNAs in ...

Characterization of long non-coding RNA-associated ceRNA network to reveal potential prognostic lncRNA biomarkers in human ovarian cancer.

DeepLNC, a long non-coding RNA prediction tool using deep neural ...

Network Modeling Analysis in Health Informatics and Bioinformatics ... long-non-coding RNA-associated diseases. Nucleic Acids Res 41 ...

Long Non-Coding RNAs Associated with Metabolic Traits in Human ...

Systematic analysis of lncRNA expression in human subcutaneous white adipose tissue. •. Identification of adipocyte-enriched lncRNAs correlating ...

Using RNAcentral to explore and investigate non coding ... - YouTube

... analysis and tooling. We will highlight commonly used data ... Noncoding RNA: Large, Small and Viral. Oligonucleotide Therapeutics ...

Comprehensive analysis of long non-coding RNAs in human breast ...

Estrogen receptor (ESR1) expression was associated with distinct lncRNA networks in lncRNA clusters III and IV. Importantly, almost two thirds ...

Staff View: Functional Analysis of Long Non-Coding RNAs

... Non-Coding Genetic Associations -- A Bioinformatic Pipeline to Integrate GWAS and eQTL Datasets to Identify Disease Relevant Human Long Non-Coding RNAs ...

Pipelines - nf-core

rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis ... differential-expressionlncrnalong-non-codingnon-codingrnarna-seq-analysis ...

Annotating genomes with non coding RNAs using Rfam and Infernal

Rfam is a database of RNA families that currently contains over 4000 families. Together with the Infernal software, Rfam is commonly used to ...

Expasy: SIB Swiss Institute of Bioinformatics

Operated by the SIB Swiss Institute of Bioinformatics, Expasy, the Swiss Bioinformatics Resource Portal, provides access to scientific databases and ...

The Human Protein Atlas

The atlas for all human proteins in cells and tissues using various omics: antibody-based imaging, transcriptomics, MS-based proteomics, and systems biology ...

Long Non-Coding RNA Part 01: finding the lncRNA #AlnC - YouTube

In this video we will to the blast analysis to find out the lncRNAs. Long non-coding RNAs (lncRNAs) have been shown to play important roles ...

The Cancer Genome Atlas Program (TCGA) - NCI

Access TCGA data through the Genomic Data Commons Data Portal, along with web-based analysis and visualization tools. TCGA Cancers Selected for Study. An ...

Analyzing RNA-seq data with DESeq2 - Bioconductor

11/14/2024. Abstract. A basic task in the analysis of count data from RNA-seq is the detection of differentially expressed genes. The count data are ...