A Lossless Compression Algorithm for DNA Sequences.

CN103995988B - High-throughput DNA sequencing mass fraction ...

The invention discloses a high-throughput DNA sequencing mass fraction lossless compression system and method. The method includes the steps that first, ...

Development of Lossless Compression Techniques for Biology ...

Figure 1 illustrates our proposed lossless compression algorithm for biological sequences. ... Figure 2: Lossless compression results for whole DNA sequences.

A Compression Algorithm for DNA Palindrome Compression ...

In order to provide efficient storage for the ciphertext there is a need to compress the generated DNA sequences[1]. The compression process reduces the amount ...

A compression method for DNA | PLOS ONE

Many general compression algorithms are not ideal for compressing DNA data, such as the LZ77 algorithm. On the basis of Nour and Sharawi's ...

SCA-NGS: Secure compression algorithm for next generation ...

Nucleotide archival format (NAF) enables efficient lossless reference-free compression of DNA sequences. Bioinformatics 2019; 35: 3826–3828 ...

A New Lossless DNA Compression Algorithm Based on A Single ...

A New Lossless DNA Compression Algorithm Based on A Single-Block Encoding Scheme. ... DNA sequences, craving for more storage and bandwidth. Unfortunately ...

FQSqueezer: k-mer-based compression of sequencing data - Nature

We present FQSqueezer, a novel compression algorithm for sequencing data able to process single- and paired-end reads of variable lengths.

Cryptography and Reference Sequence Based DNA/RNA ... - IIETA

This paper proposes two methods for the compression of biological sequences like. DNA/RNA. Although many algorithms both lossy and lossless ...

LFQC: a lossless compression algorithm for FASTQ files. - Abstract

Wan et al. (2012) proposed both lossy and lossless transformations for sequence compression and encoding. Hach et al. (2012) presented a 'boosting' scheme which ...

DNA Sequences Compression Techniques Based on ... - IAENG

In the first phase, we will use a modified version of DNABIT compression algorithm to compress and convert the. DNA sequence into binary ...

NCBI Medical Data Encryption with Lossless DNA Compression

Murugan in 2020, proposed the R-pattern algorithm using the dictionary-based compression of. DNA sequence and attains a better compression ratio ...

A Deoxyribonucleic Acid Compression Algorithm Using Auto ...

DNA compression challenge has become a major task for many researchers as a result of exponential increase of produced DNA sequences in gene ...

Design and Development of Bioinformatics Feature Based DNA ...

CONCLUSION: In this study, a new compression algorithm is being proposed for compressing DNA. Along with Inter chromosomal similarities, Intra ...

A sorting tool for improving FASTA data compression tools - EURASIP

61–66, 2001. [8] ——, “A compression algorithm for dna sequences and its applications in genome comparison,” in Proceedings of the fourth ...

A Better and Efficient DNA DATA COMPRESSOR by Fusion ... - IJCST

Algorithms for compressing DNA sequences, such as Gen Compress [1], Bio compress [2] and Fact. [5], are available as tools to manage such works. Although these.

What Is Best Current Dna Compression Algorithm? - Biostars

There is not much special about DNA data that would warrant a specialized compression algorithm. The most space-efficient representation of ...

Lossless Genomic Data Compression | Technology from Enancio ...

DRAGEN ORA (formerly Enancio's Lena) lossless genomic data compression is now available on-instrument with the NextSeq 1000/2000 Sequencing System and also ...

A New Challenge for Compression Algorithms: Genetic Sequences

We then present a lossless algorithm, biocompress-2, to compress the information contained in. DNA and RNA sequences, based on the detection ...

Compression algorithm for DNA sequences and its applications in ...

A lossless compression algorithm, GenCompress, is proposed for DNA sequences. Significantly better compression results indicated that the approximate ...

cobilab/jarvis: Efficient lossless compression of genomic sequences

Pratas D, Hosseini M, Silva JM, Pinho AJ. A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of ...