[PDF] Evaluating the potential of direct RNA nanopore sequencing ...

Evaluating the potential of direct RNA nanopore sequencing

Here, we sequenced the metatranscriptome of a pelagic crustacean community in the BPNS, using the MinION™, a nanopore-based DNA/RNA sequencing ...

Evaluating the potential of direct RNA nanopore sequencing

We report the first metatranscriptome from a pelagic crustacean zooplankton community. We generated transcripts using ONT, a third-generation nanopore ...

[PDF] Evaluating the potential of direct RNA nanopore sequencing ...

Semantic Scholar extracted view of "Evaluating the potential of direct RNA nanopore sequencing: Metatranscriptomics highlights possible seasonal differences ...

Evaluating the potential of direct RNA nanopore sequencing

Request PDF | Evaluating the potential of direct RNA nanopore sequencing: Metatranscriptomics highlights possible seasonal differences in a marine pelagic ...

Untitled

Evaluating the potential of direct RNA nanopore sequencing: Metatranscriptomics highlights possible seasonal differences in a marine pelagic crustacean ...

Evaluating the potential of direct RNA nanopore sequencing ...

1. Ghent University, Laboratory of Environmental Toxicology and Aquatic Ecology, Faculty of Bioscience Engineering, 9000, Ghent, Belgium. · 2. · 3.

Evaluating the potential of direct RNA nanopore sequencing ...

Evaluating the potential of direct RNA nanopore sequencing : metatranscriptomics highlights possible seasonal differences in a marine pelagic crustacean ...

Direct RNA nanopore sequencing of full-length coronavirus ...

Further, we aim to assess whether RNA modifications can be called directly from the raw nanopore signal of viral molecules without prior in vitro treatment, as ...

Accurate expression quantification from nanopore direct RNA ...

Other: including RNA fragments and potential sequencing artifacts (p,e,s,r). ... (2013) Assessment of transcript reconstruction methods for. RNA- ...

NERD-seq: A novel approach of Nanopore direct RNA sequencing ...

To assess the potential of NERD-seq we selected total RNA ... (2019) Nanopore sequencing: Review of potential applications in functional genomics.

Language-Informed Basecalling Architecture for Nanopore Direct ...

The sequencing of full-length RNA molecules directly is possible with Oxford Nanopore Technologies' long-read direct RNA (dRNA) sequencing platforms. The ...

(PDF) Evaluating the potential of (epi)genotype-by-low pass ...

The aim of this study was to evaluate the performance of genotype-by-low pass nanopore sequencing for estimating the direct genomic value in ...

Direct RNA sequencing on nanopore arrays redefines the ... - Nature

To evaluate the reproducibility of direct RNA sequencing using nanopore arrays, total RNA ... RNA, it should be possible, given sufficient ...

Detecting RNA modification using direct RNA sequencing

Finally, we also discussed the potential challenges and future improvements of nanopore sequencing-based methods for RNA modification detection. 1. Introduction.

Direct RNA Nanopore Sequencing of Pseudomonas aeruginosa ...

RNA was isolated and processed from the growing bacteria as quickly as possible to gain an unbiased insight into the natural RNA repertoire of ...

Direct detection of RNA modifications and structure using single ...

Here, we demonstrate direct RNA nanopore sequencing to detect endogenous and exogenous RNA modifications on long RNAs at the single-molecule level.

Direct Nanopore Sequencing of Individual Full Length tRNA Strands

However, in that 2015 study, RNA sequencing was not possible largely because the α-HL channel limiting aperture was too long to resolve ...

Peer review in Nanopore direct RNA sequencing maps the ... - eLife

5) This is a technical paper to assess the performance of Nanopore direct RNA sequencing in a pioneer manner. Since m6A RNA modification ...

NERD-seq: a novel approach of Nanopore direct RNA sequencing ...

Non-coding RNAs (ncRNAs) are frequently documented RNA modification substrates. Nanopore Technologies enables the direct sequencing of RNAs ...

Direct RNA sequencing - control experiment (SQK-RNA004)

The control experiment can be used to become familiar with nanopore sequencing technology before preparing your own library or for ...