A Lossless Compression Algorithm for DNA Sequences

A LOSSLESS COMPRESSION ALGORITHM FOR DNA SEQUENCES

LCA achieves a better compression ratio than that of existing DNA-oriented compression algorithms, when compared to GenCompress and DNACompress, using nine ...

A lossless compression algorithm for DNA sequences - PubMed

The increase of the amount of DNA sequences requires efficient computational algorithms for performing sequence comparison and analysis.

A Lossless Compression Algorithm for DNA Sequences

A Lossless Compression Algorithm (LCA) is proposed, providing a new encoding method that achieves a better compression ratio than that of existing ...

A Reference-Free Lossless Compression Algorithm for DNA ... - MDPI

For a compression method to be considered lossless, all the compressed sequences must be decompressed exactly to the original sequences. The current compression ...

A compression algorithm for DNA sequences and its applications in ...

We present a lossless compression algorithm, Gen-Compress, for DNA sequences, based on searching for approximate repeats. Our algorithm achieves the best ...

DNA Lossless Compression Algorithms: Review

Standard compression techniques failed to compress these sequences. Recently, new algorithms have been introduced specifically for this purpose. In this paper, ...

A Compression Algorithm for DNA Sequences and Its Applications ...

We present a lossless compression algorithm, GenCompress, for genetic sequences, based on searching for approximate repeats. Our algorithm achieves the best ...

A Compression Algorithm for DNA Sequences and Its Applications ...

... lossless compression algorithms for DNA sequences, namely. Biocompress and Biocompress-2, in the spirit of Ziv and Lempel data compression method [21].

A Lossless Compression Algorithm for DNA Sequences.

Recently, new algorithms have been proposed to compress DNA sequences, often using detection of long approximate repeats. The current work proposes a Lossless ...

A lossless compression algorithm for DNA sequences. - Europe PMC

Recently, new algorithms have been proposed to compress DNA sequences, often using detection of long approximate repeats. The current work proposes a Lossless ...

Lossless DNA Compression

In this dissertation, our goal is to explore lossless DNA compression algorithms, experiment with predictive probabilistic models for DNA sequences, and perform ...

DNA Lossless Compression Algorithms: Review - ResearchGate

Standard compression techniques failed to compress these sequences. Recently, new algorithms have been introduced specifically for this purpose. In this paper, ...

A New Lossless DNA Compression Algorithm Based on A Single ...

Tahi and Grumbach introduced two general modes for DNA sequence lossless compression: horizontal mode and vertical mode [5]. The horizontal (or ...

Efficient DNA sequence compression with neural networks

The increasing production of genomic data has led to an intensified need for models that can cope efficiently with the lossless compression ...

Compression of DNA sequences | Semantic Scholar

The authors propose a lossless algorithm based on regularities, such as the presence of palindromes, in the DNA, which is far beyond classical algorithms.

Compression of genomic sequencing data - Wikipedia

A recent surge of interest in the development of novel algorithms and tools for storing and managing genomic re-sequencing data

Index Based DNA Sequence Compression Algorithm - IEEE Xplore

In this paper, key principles of several existing lossless DNA sequence compression algorithms ... DNA Sequence Compression Algorithm (IBDNASCA) is proposed.

ACO:lossless quality score compression based on adaptive coding ...

To be specific, there are two major problem in the compression of DNA data: the nucleotide compression and quality score compression. The ...

A new challenge for compression algorithms: Genetic sequences

We then present a lossless algorithm, biocompress-2, to compress the information contained in DNA and RNA sequences, based on the detection of regularities, ...

Reverse Sequencing based Genome Sequence using ... - IRJET

We will introduce a DNA compression algorithm, founded on exact reverse matching which gives the best compression results on standard DNA sequences benchmark.