A Reference|Free Lossless Compression Algorithm for DNA ...

A Reference-Free Lossless Compression Algorithm for DNA ... - MDPI

In this paper, we describe a new lossless compressor with improved compression capabilities for DNA sequences representing different domains and kingdoms. The ...

[PDF] A Reference-Free Lossless Compression Algorithm for DNA ...

A new lossless compressor with improved compression capabilities for DNA sequences representing different domains and kingdoms is described, which attains a ...

A Reference-Free Lossless Compression Algorithm for DNA ... - Helda

In this paper, we describe a new lossless compressor with improved compression capabilities for DNA sequences representing different domains and kingdoms. The ...

GeneSqueeze: A Novel Lossless, Reference-Free Compression ...

GeneSqueeze: A Novel Lossless, Reference-Free Compression Algorithm for FASTQ/A Files. Foad Nazari, Sneh Patel, Melissa LaRocca, Ryan Czarny ...

A Reference-Free Lossless Compression Algorithm for DNA ... - OUCI

A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models. https://doi.org/10.3390 ...

A Reference-Free Lossless Compression Algorithm for DNA ... - MDPI

A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models ... The nature of the search is ...

A compression method for DNA - PMC

We propose a new, lossless and reference-free method to increase the compression performance. The original sequences are converted into eight intermediate ...

DNA Lossless Compression Algorithms: Review

The first special purpose DNA compression algorithm is BioCompress developed by Grumbach and Tahi[23] in 1993. This technique is based on the sliding window ...

A Lossless Compression Algorithm for DNA Sequences

A Lossless Compression Algorithm (LCA) is proposed, providing a new encoding method that achieves a better compression ratio than that of existing ...

A Reference-Free Lossless Compression Algorithm for DNA ...

A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models. Diogo Pratas, Morteza ...

A compression algorithm for DNA sequences and its applications in ...

We present a lossless compression algorithm, Gen-Compress, for DNA sequences, based on searching for approximate repeats. Our algorithm achieves the best ...

A Novel Lossless Encoding Algorithm for Data Compression - bioRxiv

... lossless and reference-free encoding algorithm. 2. Methods. The following observations can be inferred from a careful analysis of DNA. First ...

DNA Lossless Compression Algorithms: Review - ResearchGate

These algorithms infer context-free grammars to represent the input data ... using reference-based compression, Genome Research, vol. 21, 734-740. [67] ...

A LOSSLESS COMPRESSION ALGORITHM FOR DNA SEQUENCES

LCA achieves a better compression ratio than that of existing DNA-oriented compression algorithms, when compared to GenCompress and DNACompress, using nine ...

A Reference-Free Lossless Compression Algorithm for DNA ...

A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models. Diogo Pratas 1, 2, 3.

Lossless DNA Compression

The basic idea of reference-free DNA sequence compression is the exploitation of structural properties, such as palindromes, as well as statistical properties ...

A New Lossless DNA Compression Algorithm Based on A Single ...

Tahi and Grumbach introduced two general modes for DNA sequence lossless compression: horizontal mode and vertical mode [5]. The horizontal (or reference-free) ...

A New Lossless DNA Compression Algorithm Based on A Single ...

Therefore, to overcome these challenges, compression has become necessary. In this paper, we describe a new reference-free DNA compressor abbreviated as DNAC- ...

Efficient DNA sequence compression with neural networks

, et al. A reference-free lossless compression algorithm for DNA sequences using a competitive prediction of two classes of weighted models.

cobilab/jarvis: Efficient lossless compression of genomic sequences

A reference-free lossless compression algorithm for DNA sequences using a competitive prediction of two classes of weighted models.