A comprehensive benchmarking with practical guidelines for cellular ...

We benchmark 18 existing methods resolving a cellular deconvolution task with 50 real-world and simulated datasets by evaluating the accuracy, robustness, and ...

Spatial transcriptomics technologies, named “Method of the Year 2020”, have undergone rapid development in recent years. They are used to ...

A comprehensive benchmarking with practical guidelines for cellular ...

Spatial transcriptomics technologies are used to profile transcriptomes while preserving spatial information, which enables high-resolution characterization ...

(PDF) A comprehensive benchmarking with practical guidelines for ...

Here, we benchmark 18 existing methods resolving a cellular deconvolution task with 50 real-world and simulated datasets by evaluating the ...

A comprehensive benchmarking with practical guidelines for cellular ...

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics. Haoyang Li, Juexiao Zhou, Zhongxiao Li, Siyuan ...

A comprehensive benchmarking with practical guidelines for cellular ...

Kleshchevnikov, V. et al. Cell2location maps fine-grained cell types in spatial transcriptomics. Nat. Biotechnol. https://doi.org/10.1038/s41587-021-01139-4 ( ...

Benchmarking spatial and single-cell transcriptomics integration ...

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics · Biology, Computer Science. Nature Communications.

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A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics.

A comprehensive benchmarking with practical guidelines for cellular ...

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A comprehensive benchmarking with practical guidelines for cellular…

How-to reports are great! Now need to learn what spatial transcriptomics are!!

Benchmarking and integration of methods for deconvoluting spatial ...

Practical guidelines for method users. As the performance of a ... ) Comprehensive mapping of tissue cell architecture via integrated single cell ...

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Systematic evaluation with practical guidelines for single-cell and ...

The overall benchmark framework. A systematic and comprehensive evaluation of 49 simulation methods was performed to assess their accuracy, ...

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Spatial transcriptomics deconvolution at single-cell resolution using ...

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics. Article Open access 21 March ...

The summarization of benchmarking pipeline A Eighteen cellular...

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics ... Extensive benchmarking on multiple ...

Comprehensive benchmarking of computational deconvolution of ...

Moreover, they provided a guideline for method selection depending on which cell type of interest needs to be deconvolved. However, each method ...

Fourteen years of cellular deconvolution: methodology, applications ...

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A practical guide to spatial transcriptomics - OUCI

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Spotless, a reproducible pipeline for benchmarking cell type ... - eLife

(2023b) A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics. Nature Communications ...