Database for proteome|wide predictions of protein structures

AlphaFold DB provides open access to over 200 million protein structure predictions to accelerate scientific research. Background. AlphaFold is an AI system ...

Database for proteome-wide predictions of protein structures

Original Answer. It is worth saying that for model organisms, Expasy Swissmodel is the "classical" database of predicted proteome structures. It ...

Highly accurate protein structure prediction for the human proteome

Here we markedly expand the structural coverage of the proteome by applying the state-of-the-art machine learning method, AlphaFold 2 , at a scale that covers ...

PrePPI: A structure informed proteome-wide database of protein ...

We present an updated version of the Predicting Protein-Protein Interactions (PrePPI) webserver which predicts PPIs on a proteome-wide scale ...

Downloads - AlphaFold Protein Structure Database - EMBL-EBI

You can download a prediction for an individual UniProt accession by visiting the corresponding structure page (example: https://www.alphafold.ebi.ac.uk/entry/ ...

AlphaFold Protein Structure Database: massively expanding the ...

We have attempted to predict most sequences in the UniProt reference proteome in the 16–2700 amino acid length range (as well as 1400-residue ...

Challenge 5: Proteome-scale Structure Prediction Data Analysis

This capability for protein structure prediction at near-experiment accuracy has recently been realized through the use of deep learning, advanced ...

The AlphaFold Database of Protein Structures: A Biologist's Guide

In July 2021, the predicted three-dimensional models for the whole human proteome generated using AlphaFold, the deep learning algorithm developed by DeepMind, ...

Database of Predicted 3D Human Protein Structures Released

The AlphaFold Protein Structure Database builds on this innovation and the discoveries of generations of scientists, from the early pioneers of ...

A3D database: structure-based predictions of protein aggregation ...

In July 2021, a database of highly accurate structure predictions for the human proteome was published (Tunyasuvunakool et al., 2021). The predictions computed ...

PrePPI: A Structure Informed Proteome-wide Database of Protein ...

We present an updated version of the Predicting Protein-Protein Interactions (PrePPI) webserver which predicts PPIs on a proteome-wide scale.

Highly accurate protein structure prediction with AlphaFold - Nature

By developing an accurate protein structure prediction algorithm, coupled with existing large and well-curated structure and sequence databases ...

DeepMind releases most complete database of predicted human ...

more than 350,000 protein structure predictions, including the entire human proteome, to enable and accelerate research. A paper in the journal ...

DeepMind and EMBL release the most complete database of ...

DeepMind is partnering with EMBL to make the most complete and accurate database yet of the predicted human protein structures freely and ...

Proteomics Resources - hsls.pitt.edu.

... proteins whose structures have been identified by the Protein Structure Initiative. ... Predict various properties of each protein in an entire proteome.

Expasy: SIB Swiss Institute of Bioinformatics

Operated by the SIB Swiss Institute of Bioinformatics, Expasy, the Swiss Bioinformatics Resource Portal, provides access to scientific databases and ...

UniProt

UniProt is the world's leading high-quality, comprehensive and freely accessible resource of protein sequence and functional information.

A3D Database: Structure-based Protein Aggregation Predictions for ...

We discuss case studies illustrating how the database could be used to analyze physiologically relevant proteins. Furthermore, the database ...

DeepMind Releases Open Protein Structure Database Including ...

The AlphaFold Protein Structure Database includes predicted structures for all of the approximately 20,000 proteins expressed by the human ...

TmAlphaFold Transmembrane Protein Structure Database

TmAlphaFold database provides open access to the membrane orientation of 215844 alpha-helical transmembrane protein's structure predicted by AlphaFold.