Dictionary‐driven protein annotation

Dictionary-driven protein annotation - PMC - NCBI

A more recent variation of this general approach measures levels of protein expression (instead of mRNA) with the help of mass spectrometry or 2D gel ...

Dictionary-driven protein annotation - PubMed

Computational methods seeking to automatically determine the properties (functional, structural, physicochemical, etc.) of a protein directly from the ...

Dictionary-driven Protein Annotation(Search Reports) - IBM Research

In this presentation, we describe and discuss a protein annotation method that is based on the Bio-Dictionary and employs a weighted, position-specific scoring ...

(PDF) Dictionary-driven protein annotation - ResearchGate

6. Dictionary-driven protein annotation [Rigoutsos et al. 2002] is not the preferred validation methodology for them. Instead, since it is more widely ...

Dictionary-driven protein annotation - Scite

Dictionary-driven protein annotation. Isidore Rigoutsos. ,. Tien Huynh 2,. Aris Floratos 3. et al. Abstract: Computational methods seeking to automatically ...

Modeling the percolation of annotation errors in a ... - H1 Connect

Dictionary-driven protein annotation. Rigoutsos I et al.2002 Sep 1. Latest recommendation by: avatar image. Janet Thornton. 03 Sep 2002. Technical Advance ...

A dictionary based approach for gene annotation - ACM Digital Library

Human gene/protein synonym dictionary from WikiLinks. BCB '11: Proceedings of the 2nd ACM Conference on Bioinformatics, Computational Biology and Biomedicine.

Loading Public Protein Annotation Files - LabKey Support

LabKey can load data from many types of public databases of protein annotations. It can then link loaded MS2 results to the rich, biologically-interesting ...

Dictionary learning for integrative, multimodal and scalable single ...

In each case, these efforts involve careful, collaborative and expert-driven cell annotation alongside the curation of reference cell ontologies ...

Fillable Online Dictionary-driven protein annotation Fax Email Print ...

Edit dictionary-driven protein annotation. Add and change text, add new objects, move pages, add watermarks and page numbers, and more. Then click Done when you ...

A roadmap for the functional annotation of protein families

Most interpretations of genomic analyses rely on accurate functional annotations of the proteins encoded by more than 500 000 genomes sequenced ...

Automatic annotation of protein motif function with Gene Ontology ...

This paperpresents methods to mine the GO knowledge base and use the association between the GO terms assigned to a sequence and the motifs matched by the same ...

A simple and practical dictionary-based approach for identification of ...

Cited by (20) · BioTagger-GM: A Gene/Protein Name Recognition System · Gene ontology annotation as text categorization: An empirical study · Improvement in ...

Evaluation of annotation strategies using an entire genome sequence

gene, product, protein family and protein complex. The most ... (2001). Dictionary-driven protein annotation. IBM TJ Watson Research.

Results from manually comparing our predictions with the ...

Dictionary-driven protein annotation [Rigoutsos et al. 2002] is not the preferred validation methodology for them. Instead, since it is more widely ...

Is protein classification necessar ... | Article | H1 Connect

Dictionary-driven protein annotation. Rigoutsos I et al.2002 Sep 1. Latest recommendation by: avatar image. Janet Thornton. 03 Sep 2002. Technical Advance ...

Protein function prediction - Wikipedia

Thus, the annotation of new sequences is mostly by prediction through computational methods, as these types of annotation can often be done quickly and for many ...

Deep Question Answering for protein annotation - Oxford Academic

... dictionary- and redundancy-based QA engines. ... D. et al. . (. 2013. ) Managing the data deluge: data-driven GO category assignment improves ...

Annotation of protein residues based on a literature analysis

A protein annotation database, such as the Universal Protein Resource knowledge base (UniProtKb), is a valuable resource for the validation ...

Genome Annotation - an overview | ScienceDirect Topics

Genome annotation is the process of deriving the structural and functional information of a protein or gene from a raw data set