Gene Set Based Integrated Methylome and Transcriptome Analysis ...

Advanced integrative analysis of DNA methylation and transcriptomics data may provide deeper insights into smoke-induced epigenetic ...

Advanced integrative analysis of DNA methylation and transcriptomics data may provide deeper insights into smoke-induced epigenetic alterations.

(PDF) Gene Set Based Integrated Methylome and Transcriptome ...

PDF | Advanced integrative analysis of DNA methylation and transcriptomics data may provide deeper insights into smoke-induced epigenetic alterations,.

Integrative analysis of DNA methylome and transcriptome reveals ...

BPs altered DNA methylation to dysregulate genes' expression and impaired heart function. •. BPAF, BPF and BPS exerted structure-similar ...

and DNA methylation analysis of brain tissue from the temporal pole ...

2: Gene set enrichment analysis results for selected gene sets. ... In the transcriptome analysis, we identified two genes encoding ...

Integrated transcriptome and DNA methylome analysis reveal the ...

The study concludes that interspecific grafting alters gene methylation patterns, thereby activating defense responses and inhibiting the cell cycle in tomato ...

Integrated Methylome and Transcriptome Analysis Widen ... - Frontiers

DNA methylation is defined as a conserved epigenetic modification mechanism that plays a key role in maintaining normal gene expression ...

Integration of gene expression and DNA methylation data across ...

... sets of cells, specifically transcriptome and epigenome datasets. ... O. Multi-omics factor analysis—a framework for unsupervised integration of ...

Integrating DNA methylation and gene expression data in a single ...

Complex multi-omics data, including transcriptomics, epigenomics, and proteomics data, can be integrated using a network analysis approach1,2,3, ...

Integrated methylome and transcriptome analysis unravel the cold ...

Cytosine methylation, the main type of DNA methylation, regulates gene expression in plant response to environmental stress.

Integrated Methylome and Transcriptome Analysis Provides Insights ...

... based on methylome and transcriptome studies ... In the present study, comparative physiological and DNA methylation combined with transcriptome gene ...

Gene Set Based Integrated Methylome and Transcriptome Analysis ...

Gene Set Based Integrated Methylome and Transcriptome Analysis Reveals Potential Molecular Mechanisms Linking Cigarette Smoking and Related Diseases · Overview ...

Integrative methylome-transcriptome analysis unravels cancer cell ...

... genes with detectable expression in our RNA-Seq data set (18,668). Color ... WGB-Seq, microarray-based DNA methylation analyses, and RNA-Seq experiments.

Harmonization of transcriptomic and methylomic analysis in ...

... based on the established biological relationship between genomic methylation and gene ... Enriched pathways from methylome gene set enrichment analysis (GSEA) for ...

Integrated analysis of DNA methylome and transcriptome identified ...

... set of genes on the basis of existing hypotheses. Few studies ... Through array-based Comparative Genomic Hybridization (array-CGH), a genetic ...

Integrated analyses of the methylome and transcriptome to unravel ...

Therefore, the objectives of this work were 1) to evaluate sex-specific methylation marks (by WGBS) and gene expression patterns (by RNA-Seq) in the perirenal ...

Schematic diagram representing the overall gene set based ...

Advanced integrative analysis of DNA methylation and transcriptomics data may provide deeper insights into smoke-induced epigenetic alterations, their effects ...

An Integrated Epigenome and Transcriptome Analysis to Clarify the ...

... gene bodies and intergenic regions (Figure 1D). To assess the association between DNA methylation and gene expression, we selected probe sets of the ...

Integrated Analysis of DNA methylation and transcriptome profile to ...

Furthermore, random forest classifiers were constructed based on methylation data and gene expression data to distinguish AMD from controls. In addition, ...

Integrated methylome and transcriptome analysis reveals novel ...

In addition to genetic aberrations, epigenetic modifications such as DNA methylation are altered in cancer and impact gene expression. To identify epigenetic ...