Haplotype Reference Consortium

Haplotype Reference Consortium - Wellcome Sanger Institute

The Haplotype Reference Consortium (HRC) was a collaboration to create a large reference panel of human haplotypes by combining together sequencing data ...

A reference panel of 64976 haplotypes for genotype imputation

We formed the Haplotype Reference Consortium (HRC; see URLs) to bring together as many whole-genome sequencing data sets as possible to build a ...

The Haplotype Reference Consortium - EGA European Genome ...

The Haplotype Reference Consortium (HRC) will create a large reference panel of human haplotypes by combining together sequencing data from multiple cohorts ...

Reference-based phasing using the Haplotype Reference ... - Nature

... reference panels (such as the Haplotype Reference Consortium; HRC) using a new data structure based on the positional Burrows-Wheeler ...

A reference panel of 64,976 haplotypes for genotype imputation - PMC

We formed the Haplotype Reference Consortium (HRC) (see URLs) to bring ... Footnotes. URLs. Haplotype Reference Consortium. http://www.haplotype-reference- ...

HRC (Version r1.1 2016) reference panel November 2021

The Michigan Imputation Sever imputes markers with more than one copy of minor allele in the reference panel. (http://www.haplotype-reference-consortium.org).

Haplotype reference consortium panel: Practical implications of ...

Recently, the Haplotype Reference Consortium (HRC) released a large imputation panel that allows more accurate imputation of genetic variants.

Haplotype Reference Consortium Release 1.1 - EGA European ...

Haplotype Reference Consortium Release 1.1 - subset for release via the EGA Access Policy. 1 Study 128 Files (146.2 GB)

Reference-based phasing using the Haplotype ... - Broad Institute

Reference-based phasing using the Haplotype Reference Consortium panel. Nat Genet. Authors. Po-Ru Loh. Petr Danecek. Pier Palamara. Christian Fuchsberger. Yakir ...

The size and composition of haplotype reference panels impact the ...

The 1000 Genomes Project (1KGP) and the Haplotype Reference Consortium (HRC) established such reference panels for several human ancestry ...

Reference Panels - Michigan Imputation Server - Read the Docs

http://www.haplotype-reference-consortium.org; HRC r1.1 Release Note. 1000 Genomes Phase 3 (Version 5). Phase 3 of the 1000 Genomes Project consists of 5,008 ...

SNP-HLA Reference Consortium (SHLARC) - HAL

Haplotypes are a combination of genetic variants on one chromosome, they can be SNP haplotype. (e.g., 011010, referring as the presence or ...

Genotypes were imputed to the Haplotype Reference Consortium ...

Genotypes were imputed to the Haplotype Reference Consortium (HRC) reference panel of. 64,976 haplotypes at 39,235,157 SNPs across the genome, all with an ...

high-resolution haplotype-resolved Reference panel constructed ...

In recent years, in addition to the international haplotype reference projects, national haploid genome sequence consortiums have also been initiated in various ...

McCarthy Group Tools

... Haplotype Reference Consortium Website here: http://www.haplotype-reference-consortium.org/site. Usage: perl HRC-1000G-check-bim.pl -b -f ...

Exploration of haplotype research consortium imputation for genome ...

The HRC dataset is the largest available haplotype reference panel for imputation of variants in populations of European ancestry and allows ...

: Category 100319 - UK Biobank

The Haplotype Reference Consortium (HRC) panel was used wherever possible, but for SNPs not in that reference panel the UK10K + 1000 Genomes panel was used. The ...

[PDF] Reference-based phasing using the Haplotype Reference ...

Reference-based phasing using the Haplotype Reference Consortium panel · Po-Ru Loh, P. Danecek, +9 authors. Alkes L Price · Published in Nature Genetics 7 July ...

Practical implications of imputations with large reference panels.

Recently, the Haplotype Reference Consortium (HRC) released a large imputation panel that allows more accurate imputation of genetic variants.

Haplotype reference consortium panel: Practical implications of ...

Abstract Recently, the Haplotype Reference Consortium (HRC) released a large imputation panel that allows more accurate imputation of ...