Integrated analysis of single|cell and bulk transcriptome identifies a ...

Integrated analysis of single-cell and bulk transcriptome identifies a ...

This study aimed to construct an NK cell marker gene signature (NKMS) to predict prognosis and therapeutic response of clear cell renal cell carcinoma (ccRCC) ...

Integrated analysis of single-cell and bulk transcriptome identifies a ...

This signature significantly correlates with clinical features as an independent risk indicator and reveals close relationship with immunosuppression in ccRCC.

Integrated analysis of single-cell RNA sequencing and bulk ... - Nature

This study established a pyroptosis-related diagnostic model for PD through the analyses of scRNA-seq combined with bulk transcriptome data, ...

Integrated single-cell and bulk RNA sequencing analysis identifies a ...

1) and integrated downstream analysis of single-cell transcriptome profiles. The data were quality controlled. Cells with fewer than 300 ...

Integrated analysis of single-cell and bulk RNA sequencing data ...

We revealed a robust link between cancer stemness and immunotherapy resistance and developed a promising signature, Stem.Sig, which showed increased ...

Integrative single-cell and bulk transcriptome analyses identify a ...

This study integrates single-cell and bulk transcriptome data to recognize a distinct pro-tumor macrophage cluster significantly associated with the prognosis ...

Integrated analysis of single-cell and bulk RNA-sequencing ...

Ovarian cancer represents a severe gynecological malignancy with a dire prognosis, underscoring the imperative need for dependable ...

Integrative analysis of single-cell and bulk transcriptome data reveal ...

We attempted to identify abnormal immune cell components and signaling pathways in lupus nephritis (LN) and to identify potential ...

Integrated analysis of single-cell RNA-seq and ... - ScienceDirect.com

Although bulk RNA-seq can provide a large amount of tumor immune gene expression data, it is unable to detect the relationship between cellular interactions, ...

Integrative Single-Cell and Bulk Transcriptomes Analyses Identify ...

We sought to define the intrinsic epithelial subtypes for HNSCC by integrative analyses of single-cell and bulk RNA sequencing datasets from multiple cohorts.

Integrated analysis of single-cell and bulk RNA-sequencing ...

Subsequently, we constructed a 5-gene prognostic signature in the training cohort based on the T-cell marker genes from the cancer genome atlas ...

Integrated analysis of single-cell RNA-seq and bulk RNA-seq to ...

Highlights. •. An approach for identifying the molecular mechanisms of the immune microenvironment during IGC development was described.

Integrated analysis of single-cell chromatin state and transcriptome ...

To detect these focal amplifications from snATAC-Seq data, we adapted a previous method (19) to detect CNVs from bulk ATAC-seq data (SI Appendix ...

Integrated analysis of single-cell and bulk RNA-sequencing reveals ...

Background: Natural killer (NK) cells are a type of innate immune cell that recognize and eliminate tumor cells and infected cells, ...

Integrated analysis of single-cell RNA-seq and bulk RNA-seq ...

Different from traditional bulk RNA sequencing, single-cell sequencing technology obtains transcriptome profiles at the level of a single-cell ...

An integrative analysis of single-cell and bulk transcriptome ... - OUCI

An integrative analysis of single-cell and bulk transcriptome and bidirectional mendelian randomization analysis identified C1Q as a novel stimulated risk gene ...

Integrated analysis of single-cell RNA-seq and bulk ... - ResearchGate

Combination of single-cell and bulk tissue transcriptome profiling allows the characterization of tumour heterogeneity and identifies the association of the ...

Integrated analysis of single-cell and bulk transcriptomics develops ...

Thus, our model offers a useful reference for precise identification and characterization of NE tumor cells. Materials and Methods. Single-cell RNA-seq data ...

Integrated analysis of single-cell and bulk - ProQuest

Prognostic modeling of NK cell marker genes in patients with hepatocellular carcinoma based on single cell sequencing and transcriptome data analysis. Methods.

Integrated Analysis of Single-Cell and Bulk RNA-Seq Data reveals ...

Conclusions We have uncovered the tumor immune cell clusters in TNBC mediated by ferroptosis. A risk score model was constructed to identify ...