Integration of public DNA methylation and expression networks via ...

Integration of public DNA methylation and expression networks via eQTMs improves prediction of functional gene–gene associations ... This article ...

The eQTMs we identified can be used as an annotation resource for epigenome-wide association, and we believe that our integration pipeline can ...

Integration of public DNA methylation and expression networks via ...

Integration of public DNA methylation and expression networks via eQTMs improves prediction of functional gene–gene associations · Topics · 1 Citation · 49 ...

Supplementary materials for "Integration of public DNA methylation ...

Supplementary materials for "Integration of public DNA methylation and expression networks via eQTMs improves prediction of functional gene–gene associations".

Integration of public DNA methylation and expression networks via ...

Integration of public DNA methylation and expression networks via eQTMs improves prediction of functional gene–gene associations.

Integrating DNA methylation and gene expression data in a single ...

Integrating DNA methylation and gene expression data in a single gene network using the iNETgrate package. Sci Rep. 2023 Dec 8;13(1):21721. doi: 10.1038/ ...

A Genome-Wide Integrative Association Study of DNA Methylation ...

Integration of DNA methylation data and gene expression data has been ... Integrative analysis of hippocampus gene expression profiles identifies network ...

Integrative analysis of DNA methylation and gene expression ...

Integrated protein network and microarray analysis to identify potential biomarkers after myocardial infarction. Funct Integr Genom. 2010;10 ...

Integrative analysis of DNA methylation and gene expression ...

Here, we performed weighted gene co-expression network analysis (WGCNA) to identify modules and dysregulated genesinvolved in biological aging in AD.

DNMIVD: DNA methylation interactive visualization database

... expression dataset from Gene Expression Omnibus and other public sources besides TCGA. ... integrate DNA methylation and gene expression data. We ...

Methods in DNA methylation array dataset analysis: A review

(i) DL is a type of neural network that can learn complex patterns of methylation expression in data. ... (i) Methylmix r package integrates gene expression and ...

Genome-wide DNA methylation and gene expression analyses in ...

Weighted gene co-expression network analysis (WGCNA) was performed for gene expression data. The association of DNA methylation levels of 66 CpG ...

Transcriptomics and epigenetic data integration learning module on ...

Existing integration techniques involve correlating DNA methylation patterns, histone modifications, and non-coding RNA with gene expression ...

Neighborhood Deprivation and DNA Methylation in Breast Tumors

In this study, high neighborhood deprivation was associated with differences in tissue DNA methylation and gene expression among Black women.

Integrated Analysis of DNA methylation and transcriptome profile to ...

... DNA methylation and gene expression under protein interaction networks. FEM ... expression and thus choroidal neovascularization via Cyr61-PI3K/AKT signaling ...

Integrated multiplex network based approach for hub gene ...

In this work, we focused on the entire multiplex structure of the genetic network integrating the gene expression profile and DNA methylation profile for OC.

Multiple network algorithm for epigenetic modules via the integration ...

With the increase in the amount of DNA methylation and gene expression data, the epigenetic mechanisms of cancers can be extensively ...

An integrated analysis of DNA promoter methylation, microRNA ...

Figure 1 Interrelated networks in the context of DEGs, differentially expressed miRNAs, and gene expression. Methylation and microRNA regulatory network of 31 ...

Co-expression network of mRNA and DNA methylation in first ...

We explored the DNA methylation and messenger RNA (mRNA) co-expression network and hub genes in first-episode, drug-naive adolescents with major depressive ...

Integrative Network Analysis of Differentially Methylated and ...

Genome-wide DNA methylation and gene expression are commonly altered in pediatric acute lymphoblastic leukemia (PALL). Integrated network ...