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Multiple Competition|Based FDR Control and Its Application to ...


Multiple Competition-Based FDR Control and Its Application to ...

Competition-based FDR control has been commonly used for over a decade in the computational mass spectrometry community [5]. Recently, the approach has gained ...

Multiple Competition-Based FDR Control and Its Application to ...

Competition-based FDR control has been commonly used for over a decade in the computational mass spectrometry community [5].

Multiple Competition-Based FDR Control and Its Application to ...

Multiple Competition-Based FDR Control and Its Application to Peptide Detection · Abstract · References · Cited By · Index Terms · Recommendations · Comments.

Multiple competition-based FDR control for peptide detection - arXiv

In both cases, the competition is based on a head-to-head comparison between an observed score and a corresponding decoy / knockoff. Keich and ...

Multiple Competition-Based FDR Control and Its Application to ...

Request PDF | Multiple Competition-Based FDR Control and Its Application to Peptide Detection | Competition-based FDR control has been commonly used for ...

Supplementary Material to: Multiple competition-based FDR control ...

In the multiple hypotheses testing (MHT) set up we simultaneously test m (null) hy- potheses H1,...,Hm, looking to reject as many as possible subject to ...

Supplementary Material to: Multiple competition-based FDR control ...

This work has shown that applying their selection procedure (BH) at level α controls the expected value of Q at that level, provided the true null pvalues ...

Multiple Competition-Based FDR Control and Its Application to ...

Multiple Competition-Based FDR Control and Its Application to Peptide Detection. https://doi.org/10.1007/978-3-030-45257-5_4 ·. Journal: Lecture Notes in ...

Multiple competition based FDR control - Kristen Emery - SciSpace

TL;DR: This work develops a data driven approach, which is based on a novel resampling procedure and which tries to select the most appropriate procedure ...

Multiple competition based FDR control | Semantic Scholar

This work develops a data driven approach, which is based on a novel resampling procedure and which tries to select the most appropriate procedure for the ...

Competition-Based Control of the False Discovery Proportion

FDR control is a popular approach to the analysis of multiple testing. However, it should not be confused with controlling the false discovery proportion (FDP).

noblelab / multi-competition-fdr - Bitbucket

Supplement to the paper "Multiple Competition-Based FDR Control and Its Application to Peptide Detection" by Kristen Emery, Syamand Hasam, William Stafford ...

Clipper: p-value-free FDR control on high-throughput data from two ...

The most widely used criterion to ensure the analysis reliability is the false discovery rate (FDR), which is primarily controlled based on p-values. However, ...

A practical guide to methods controlling false discoveries in ...

Of the modern FDR-controlling methods included in our comparison, IHW, BL, AdaPT, and LFDR can be applied generally to any multiple testing ...

Controlling the false discovery rate via competition: Is the +1 needed?

... the actual competition-based FDR control. As SSS + forms the basis for finite sample FDR-control, it is natural to ask whether the +1 in the numerator of ...

Improving peptide-level mass spectrometry analysis via double ...

Recently, the same competition-based approach to control the FDR ... two distinct messages related to decoy-based FDR control in mass ...

Null-free False Discovery Rate Control Using Decoy Permutations

The traditional approaches to false discovery rate (FDR) control in multiple hypothesis testing are usually based on the null distribution ...

Aggregating Universal Proteomics Database Search Algorithms for ...

... two algorithms failed to guarantee the FDR control ... U. Multiple competition-based FDR control and its application to peptide detection.

False Discovery Rate

... two-sample comparative study based on FDR control and sensitivity. ... This video lecture was helpful in learning about the application of FDR control on discrete ...

Semi-supervised learning while controlling the FDR with ... - bioRxiv

Multiple competition-based fdr control and its application to peptide detection. In International Conference on Research in Computational ...