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PDBx/mmCIF General FAQ


PDBx/mmCIF General FAQ - wwPDB

PDBx/mmCIF became the standard PDB archive format in 2014. All PDB data processing and annotation will be performed using PDBx/mmCIF at all wwPDB sites.

PDBx/mmCIF FAQ - wwPDB

The PDBx/mmCIF data files produced by the wwPDB conform to both the CIF 1.0 and 1.1 syntax specifications. The current syntax specification for CIF 1.1 is ...

Beginner's Guide to PDB Structures and the PDBx/mmCIF Format

The PDBx/mmCIF file format and data dictionary is the basis of wwPDB data deposition, annotation, and archiving of PDB data from all supported experimental ...

[wwPDB] Announcing the New PDBx/mmCIF User Guide

As the foundation for depositing, annotating, and archiving structural data across diverse experimental techniques, the Protein Data Bank ...

Beginner's Guide to PDB Structures and PDBx/mmCIF

PDB-101 hosts an introductory guide to the PDBx/mmCIF file format and data dictionary used in all wwPDB data deposition, annotation, and archiving.

Announcing the New PDBx/mmCIF User Guide

Our user-friendly guide offers detailed explanation and examples of essential PDBx/mmCIF records, aimed to facilitate a smooth transition to this format.

PDBx/mmCIF format - Not your parents' legacy PDB format - YouTube

This course is designed to help users understand the basics of PDBx/mmCIF data dictionary and file format that underpin the archiving of ...

PDBx/mmCIF Ecosystem: Foundational Semantic Tools for ... - NCBI

PDBx/mmCIF, Protein Data Bank Exchange (PDBx) macromolecular Crystallographic Information Framework (mmCIF), has become the data standard ...

PDB format - PDBx/mmCIF conversion service

You can convert a molecular structural data into another format. The type of uploaded file is determined automatically.

Announcing mandatory submission of PDBx/mmCIF format files for ...

... PDBx/mmCIF framework for data representation. Funding Statement. This work was funded by National Science Foundation; National Institute of General Medical ...

Use PDB Data to Their Full Extent: Understanding PDBx/mmCIF

Use PDB Data to Their Full Extent: Understanding PDBx/mmCIF. 359 views · 1 year ago ...more. Rutgers - Institute of Quantitative Biomedicine.

rcsb pdb on X: "New wwPDB PDBx/mmCIF User Guide ...

New wwPDB PDBx/mmCIF User Guide provides explanations and examples of essential PDBx/mmCIF file format records. Feedback is welcome via a ...

PDB vs PDBx - Getting to know Structural Bioinformatics

http://mmcif.wwpdb.org/docs/faqs/pdbx-mmcif-faq-general.html. Accessed: 2014-03-07. (Archived by WebCite at http://www.webcitation.org ...

DepositionMmCif - Kwiki - Global Phasing

A refinement program should always provide two PDBx/mmCIF files ready for deposition: one for the model and one for the reflection data. In general, these would ...

Worldwide PDB - Announcing the New PDBx/mmCIF User Guide...

Announcing the New PDBx/mmCIF User Guide This User Guide offers detailed explanation and examples of essential PDBx/mmCIF records, aimed to facilitate a...

ModelCIF: An Extension of PDBx/mmCIF Data Representation for ...

Community-driven data representation for computed structure models (CSMs) of biological macromolecules. •. Provides common data representation and tools ...

IHMCIF: An Extension of the PDBx/mmCIF Data Standard for ...

As structural biology evolved, a more general and flexible system for defining data standards was required to support larger structures and new experimental ...

PDBx/mmCIF - FAIRsharing

SUPPORT. Frequently Asked Questions (FAQs). PDBx/mmCIF FAQ. Help ... Name: General Contact. DATA PROCESSES AND CONDITIONS. Processes. Name.

mmcifpdbx

This is yet another PyPI package for http://mmcif.wwpdb.org/pdbx-mmcif-home-page.html. ... • General code de-linting. (#1, #6, #14).

PDBeCIF: an open-source mmCIF/CIF parsing and processing ...

... PDBx/Macromolecular Crystallographic Information File format (PDBx/mmCIF) is still not widespread ... general incompatibility in the near future.