Pangenome Analysis Reveals a High Degree of Genetic ...

Pangenome Analysis Reveals a High Degree of Genetic Diversity in ...

This study aimed to conduct bioinformatic analyses focused on pangenomics to investigate the complete gene repertoire of the species.

Pangenome Analysis Reveals a High Degree of Genetic Diversity in ...

Genomes of the bacterium available in online databases were used for comparative genomics, genomic plasticity, gene synteny, and pangenome prediction analyses.

Pangenome analysis reveals the genetic basis for taxonomic ...

... large extent, from their genome sequences. The genomics of lactic acid bacteria has been studied since 2001 when the first genomes were sequenced (Bolotin ...

Pangenome Analysis Reveals a High Degree of Genetic Diversity in ...

Pangenome Analysis Reveals a High Degree of Genetic Diversity in Gardnerella vaginalis: An In Silico Approach. Venereology 2023, 2(4), 132-146; https://doi ...

Pangenome analysis reveals genomic variations associated with ...

A two-sided Wilcoxon test was used to determine the significant levels. g, Comparison of gene expressions between PAV and non-PAV genes in the ...

Pangenome Analysis Reveals a High Degree of Genetic ... - Altmetric

Click here to find out more. Title. Pangenome Analysis Reveals a High Degree of Genetic Diversity in Gardnerella vaginalis: An In Silico Approach.

Pangenome analysis reveals the genetic basis for taxonomic ...

Lactobacillaceae represent a large family of important microbes that are foundational to the food industry. Many genome sequences of Lactobacillaceae ...

Pangenome analysis provides insights into the genetic diversity ...

A pangenome analysis revealed ... Flavobacterium spp. had high levels of diversity, allowing for novel gene repertories via recombination events.

Functional pangenome analysis reveals high virulence plasticity of ...

Considering their genomic plasticity (high level of intra-group shared genes, low or absent singletons) and phylogenetic analysis, the isolates from pig ...

Pan-Genome Analysis Reveals the Abundant Gene Presence ...

To a greater extent, the pan-genome represents the genomic variation in one species gene pool. Variable genes help to generate diversity traits ...

Comparative pangenomics: analysis of 12 microbial pathogen ...

Large-scale genomics reveals the genetic characteristics of seven species and importance of phylogenetic distance for estimating pan-genome size ...

Pangenome analyses reveal impact of transposable elements and ...

... high levels of TEs. Results ... (21), also noted TEs for the cloud and high copy number genes of the tetraploid potato pangenome (21).

Pangenome graph analysis reveals extensive effector copy-number ...

... reveals overall high conservation but highly variable TE and effector genes. To enable the comparisons between the P. effusa chromosome-level genome ...

Pangenome analysis reveals genetic isolation in Campylobacter ...

To determine the degree of genetic variability among the new C. ... Rapid phylogenetic analysis of large samples of recombinant bacterial ...

Pangenome analysis reveals transposon-driven genome evolution ...

Genes with copy number loss had shorter coding length, lower expression levels, and higher Ka/Ks values and TE coverage (P < 2.2 × 10 −6, Wilcox ...

Human pangenome analysis of sequences missing from the ...

Based on previous studies that reported higher genetic ... G. Characterization of structural variation in Tibetans reveals new evidence of high- ...

Pangenomics Analysis Reveals Diversification of Enzyme Families ...

A recent paper showed that some SAR202 members encode large numbers of RHDs, which were likely acquired by horizontal gene transfer (HGT), in their genomes and ...

Pan Genome

The Introduction of Pan Genome Sequencing · Core Genome: This segment comprises genes ubiquitously present across all strains of the species.

BGCFlow: systematic pangenome workflow for the analysis of ...

Based on the assembly quality, the genomes were categorized into three groups: (i) HQ (high-quality genomes of complete genome or chromosome level assembly as ...

Pangenome graph analysis reveals extensive effector copy-number ...

This high-resolution pangenomic framework enabled detailed comparisons of the genomes at any level, from the nucleotide to the chromosome, and ...