ProBiS|Dock Database
ProBiS-Dock Database: Home page
The aim of the database. Provide downloadable binding sites ready for docking and inverse docking (last update on Feb 8 2021, contains PDBs till Jul 31 2020) ...
ProBiS-Dock Database: A Web Server and Interactive Web ...
The interactive ProBiS-Dock Database, a web server and repository that consists of all small-molecule ligand binding sites in all of the protein ...
ProBiS-Dock Algorithm - Insilab
ProBiS-Dock algorithm is a docking algorithm complementary to the ProBiS-Dock Database that treats small molecules and proteins as fully flexible entities.
ProBiS-Dock Database: A Web Server and Interactive ... - PubMed
We have developed a new system, ProBiS-Dock, which can be used to determine the different types of protein binding sites for small ligands.
ProBiS-Dock method and database for efficient development of new ...
A protein ligand binding site is defined as the space occupied by the union of all of its predicted ligands obtained from similar binding sites in the PDB using ...
ProBiS-Dock Database: A Web Server and Interactive Web ...
The ProBiS Tools are the first to allow the identification of interactions between protein structures, the prediction of ligand selectivity and binding, and the ...
ProBiS-Database: Precalculated Binding Site Similarities and Local Pairwise Alignments of PDB Structures. J. Chem. Inf. Model., 2012, 52, 604-612. Konc,J. and ...
ProBiS-Dock Database | BiŌkeanós
A Web Server and Interactive Web Repository of Small Ligand-Protein Binding Sites for Drug Design. Description. More detailed information about this field ...
ProBiS-Database: Precalculated Binding Site Similarities and Local ...
ProBiS-Database is a repository of local structural similarities between all nonredundant protein structures. It allows detection of similar ...
ProBiS-Dock: A Hybrid Multitemplate Homology Flexible Docking ...
The protein data bank (PDB) is a rich source of protein ligand structures, but ligands are not explicitly used in current docking algorithms ...
PROBIS - Database Commons - National Genomics Data Center
A catalog of worldwide biological databases. Search eg, human; SARS-CoV-2; lncRNA; single cell; spatial omics; immune; Oryza sativa; European Bioinformatics ...
ProBiS tools (algorithm, database, and web servers) for predicting ...
Abstract. ProBiS (Protein Binding Sites) Tools consist of algorithm, database, and web servers for prediction of binding sites and protein ligands based on the ...
ProBiS-Dock Database: A Web Server and Interactive ... - COBISS+
ProBiS-Dock Database: A Web Server and Interactive Web Repository of Small Ligand–Protein Binding Sites for Drug Design.
a web server for detection of structurally similar protein binding sites ...
In this article, we introduce ProBiS (protein binding sites), a web server for the recognition of similar surface regions in a database of non-redundant ...
ProBiS-Drug Discovery: a comprehensive web server for integrating ...
... database but also accommodates custom-designed protein structures, hitherto unavailable. Leveraging our well-established ProBiS tools for protein binding ...
ProBiS-Dock Database: A Web Server and Interactive Web ... - OUCI
ProBiS-Dock Database: A Web Server and Interactive Web Repository of Small Ligand–Protein Binding Sites for Drug Design.
ProBiS-ligands: a web server for prediction of ... - Oxford Academic
Starting with a protein structure or binding site, ProBiS-ligands first identifies template proteins in the Protein Data Bank that share similar ...
A practical guide to large-scale docking | Nature Protocols
A binding mode and receptor structure were identified that was consistent with the mutagenesis data and used for subsequent preparation in the ...
CB-Dock: An accurate protein-ligand blind docking tool - Cyscore
PDB Tools · SRSD. Institute. SICHUAN UNIVERSITY · CGMA. Chemistry Databases. BindingDB · ChEMBL · DrugBank · PubChem · ZINC. Protein Structure Databases.