STAARpipeline apps
xihaoli/STAARpipeline - GitHub
Please see the apps staarpipeline, staarpipelinesummary_varset and staarpipelinesummary_indvar that run on the UK Biobank Research Analysis Platform for more ...
STAARpipeline apps: Enhancing Rare Variant Analysis in Whole ...
Running GWAS and PheWAS using the STAARpipeline on the Seven Bridges Platforms ... With emerging need to identify genetic components of complex ...
xihaoli/STAARpipeline-Tutorial - GitHub
FAVORannotator, STAARpipeline and STAARpipelineSummary are implemented as a collection of apps for cloud-based platforms. Please see the following apps.
STAARpipeline: an all-in-one rare-variant tool for biobank-scale ...
They not only developed the convenient, robust and resource-efficient software STAARpipeline ... apps and workflows. Special thanks go to ...
STAAR is a general framework that incorporates both qualitative functional categories and quantitative complementary functional annotations using an omnibus ...
STAARpipeline performs phenotype-genotype association analyses using STAAR procedure. The app is designed for analyzin... ... STAARpipeline PheWAS performs the ...
Description. STAARpipeline performs phenotype-genotype association analyses using STAAR procedure. The app is designed for analyzing whole- ...
STAARpipeline performs phenotype-genotype association analyses using STAAR procedure. The app is designed for analyzin... GWAS CWLtool Tested.
STAARpipeline – Lin Lab - Harvard T.H. Chan School of Public Health
STAARpipeline is an R package for phenotype-genotype association analyses of WGS/WES data, including single variant analysis and variant set analysis.
Velsera on X: "Rare variants in genomics unlock critical disease ...
Rare variants in genomics unlock critical disease insights, but finding them is tough—until now. Velsera's STAARpipeline apps revolutionize ...
STAAR Pipeline for GWAS - YouTube
Open App. This content isn't available. STAAR Pipeline for GWAS. 66 views · 1 year ago ...more. NHLBI BioData Catalyst.
STAARpipeline apps: Enhancing Rare Variant Analysis in Whole-Genome Sequencing Studies. Overview of STAARpipeline apps. go to article · Level Up your ...
STAAR framework - variant-set test using annotation
STAARpipeline: Develop a pipeline that functionally annotates both noncoding ... Slide from presentation of ACAT application in STAAR by Dr. Xihong Lin ...
Lin Lab - Harvard T.H. Chan School of Public Health
... software developers, and doctoral students. To support our research, we developed novel software programs including FAVOR, STAAR, and STAARpipeline. We also ...
Rehabilitation for patients with stroke and TIA.
Newly Published Apps: Materials from 5/17/2023 Community Hours
... Apps 04:04 - 16:56 : STAAR Pipeline 16:56 - 23:52 : MetaCyto Workflows 23:52 - 39:30 : OmicsCircos for Genomic Visualization 39:30 - 52:28 : Q&A View full ...
What are the tools that can be used in the UKB RAP for variant ...
I got these files using the Mutectcaller app ... STAARpipeline / FAVORAnnatator on UKB RAP. If I can add these apps/pipelines to my tool library, ...
A framework for detecting noncoding rare variant associations of ...
We demonstrate the computational efficiency of STAARpipeline in application ... Dynamic window analysis using SCANG-STAAR. The STAARpipeline ...
A framework for detecting noncoding rare variant associations of ...
computational efficiency of STAARpipeline in application to the WGS association analysis of a range of traits up to ~40,000 TOPMed samples. The optimization ...
Machine Learning Seminar Series with Zilin Li | Data Science Initiative
STAARpipeline: an all-in-one rare-variant analysis tool for biobank-scale whole-genome sequencing data Large-scale whole-genome sequencing (WGS) studies ...