Software Engineering for Bioinformatics

Software Engineering for Bioinformatics — Domain Specificity

The success of software engineering for bioinformatics begins with the education of engineers, and a key element is teaching domain specificity.

Software Engineering Education for Bioinformatics - IEEE Xplore

Abstract: As software engineering educators, it is important for us to realize the increasing domain-specificity of software, and incorporate these changes ...

Engineering bioinformatics: building reliability, performance and ...

We conclude by recommending an educational emphasis on cross-training software engineers into life sciences, and propose research on Domain Specific Languages ...

Bioinformatics Software Development: Process, Use Cases, Insights ...

Bioinformatics software often offers modular designs, allowing users to tailor workflows, algorithms, and interfaces to their specific research ...

Software Engineering Education for Bioinformatics - AMiner

As software engineering educators, it is important for us to realize the increasing domain- specificity of software, and incorporate these changes in our design ...

Balancing Technical and Domain Knowledge in Bioinformatics

Bioinformatics is a multidisciplinary field that combines biology, computer science, mathematics, and statistics to analyze and interpret ...

Software engineering challenges in bioinformatics - IEEE Xplore

We introduce the main sources of biological data available and outline some of the domain specific problems associated with automated analysis. We discuss ...

Domain-specific introduction to machine learning terminology ...

Equipping researchers with the knowledge to effectively use ML to better design gene-editing experiments and predict experimental outcomes will ...

I'm a software engineer. How can I learn biology, just enough to ...

How can I learn biology, just enough to write software for the bioinformatics domain? ... specific interest. I've never utilized Linkedin ...

Software Engineering Education for Bioinformatics

Bioinformatics software is an example of immensely complex and critical scientific software and this domain provides an excellent illustration of the role of ...

Bioinformatics software development: Principles and future directions

Bioinformatics software development is a multidisciplinary field that combines biology, computer science, and software engineering to analyze and interpret ...

Improving bioinformatics software quality through incorporation of ...

Bioinformatics engineers often lack the software engineering skills necessary for developing robust, maintainable, reusable software. This study ...

Lack of Software Engineering Practices in the Development of ...

... bioinformatics-specific designer tools that simplify many of the programming ... ment engineering approach for the domain of bioinformatics where applied ...

Domain-specific programming languages for computational nucleic ...

This review focuses on efforts to address this need by using domain-specific programming languages as the basis for custom design tools for ...

A Scientific Software Product Line for the Bioinformatics domain

Most specialized users (scientists) that use bioinformatics applications do not have suitable training on software development. Software Product Line (SPL) ...

Software engineering education for bioinformatics - Mayo Clinic

Bioinformatics software is an example of immensely complex and critical scient/ic software and this domain provides an excellent illustration of the role of ...

Has anyone made the transition from Bioinformatics to Software ...

... software engineering applied to bioinformatics, computational biology, and data science in general. ... is knowledge of the domain - the ...

Software Engineering Education for Bioinformatics | Request PDF

Bioinformatics software is an example of immensely complex and critical scientific software and this domain provides an excellent illustration of the role of ...

Comparing bioinformatics software development by computer ...

we want to focus on developers who do not have any domain-specific training. We are planning to continue this work within the biomedical domain, eventually.

Development of a domain-specific genetic language to design ...

Most bioinformatics software packages include sequence editors that facilitate the design and assembly of new DNA sequences. Automatic recognition of ...