Spatial Transcriptomics

An introduction to spatial transcriptomics for biomedical research

An increasing number of commercially available platforms now facilitate spatially resolved, high-dimensional assessment of gene transcription, known as ' ...

Method of the Year: spatially resolved transcriptomics - Nature

With spatially resolved transcriptomic methods, scientists can get transcriptomic data and know the positional context of those cells in a tissue.

Spatial Transcriptomics & Spatial Biology - 10x Genomics

Spatial transcriptomics is a quantitative readout of either whole transcriptome or targeted gene expression mapped to specific locations in a tissue section.

Spatial transcriptomics - Wikipedia

Spatial transcriptomics ... Spatial transcriptomics is a method for assigning cell types (identified by the mRNA readouts) to their locations in the histological ...

Museum of spatial transcriptomics | Nature Methods

We present a curated review of literature on spatial transcriptomics dating back to 1987, along with a thorough analysis of trends in the field.

Spatial Transcriptomics - Illumina

Benefits of Spatial Transcriptomics. A key benefit of spatial transcriptomics is that it provides a topographical arrangement of gene expression patterns mapped ...

Spatial Transcriptomics - NanoString

Spatial transcriptomics provides useful analytics data for scientists as it provides single-cell resolution but within a cellular context. Learn more!

Spatial Transcriptomic Technologies - PMC - PubMed Central

Spatial transcriptomic technologies enable measurement of expression levels of genes systematically throughout tissue space.

A guidebook of spatial transcriptomic technologies, data resources ...

We provide a detailed discussion and outlook of the spatial transcriptomic technologies, data resources and analysis approaches to guide current and future ...

Visium Spatial Gene Expression - 10x Genomics

It allows you to perform spatial transcriptomics, which combines histological information with whole transcriptome gene expression profiles (fresh frozen or ...

Advances in spatial transcriptomics and related data analysis ...

In this review, we summarize available technologies of spatial transcriptomics, probe into several applications, discuss the computational strategies and raise ...

Spatial Transcriptomics Overview - NanoString

Spatial gene expression is the visualization of gene expression patterns in three dimensions within cells in their native state.

CROST: a comprehensive repository of spatial transcriptomics

CROST allows users to simultaneously view spatial transcriptome data alongside paired single-cell transcriptome data, providing a comprehensive ...

Spatial Transcriptomics - YouTube

Spatial transcriptomics, In situ hybridization, In situ sequencing, In situ capturing, Single-cell RNA-sequencing, Cell-cell interactions ...

Computational solutions for spatial transcriptomics - ScienceDirect

This review covers the topics that help choosing the platform and computational solutions for spatial transcriptomics research.

Advances in spatial transcriptomics and its applications in cancer ...

Spatial transcriptomics is a technology that integrates imaging, biomarkers analysis, sequencing, and bioinformatics to precisely locate gene expression within ...

Visualization and analysis of gene expression in tissue ... - Science

Spatial transcriptomics provides quantitative gene expression data and visualization of the distribution of mRNAs within tissue sections and ...

W31: Spatial Transcriptomics – Day 1 - YouTube

Spatial transcriptomics is an emerging field that bridges molecular biology and anatomy. Over the last decade, a battery of assays have been ...

Spatial Transcriptomics | University of Michigan Medical School

The Visium CytAssist workflow follows a standard histological workflow: sectioning, tissue preparation, staining (H&E or IF), and imaging all take place on a ...

Spatial transcriptomics - France Génomique

Spatial transcriptomics is a technology that combines high-throughput gene expression profiling with spatial information of cells in tissues or organs. It ...