Testing genotyping strategies for ultra‐deep sequencing of a co ...

Testing genotyping strategies for ultra-deep sequencing of a co ...

We thus demonstrate that gene families with many co-amplifying genes can be reliably genotyped using HTS, provided that there is sufficient per amplicon ...

According to the most repeatable genotyping method, the number of co-amplifying variants per individual ranged from 19 to 42. Tag jumping was ...

Testing genotyping strategies for ultra‐deep sequencing of a co ...

High reliability of the tested genotyping approaches was further supported by our analysis of the simulated data set, although the genotyping ...

[PDF] Testing genotyping strategies for ultra‐deep sequencing of a ...

It is demonstrated that gene families with many co‐amplifying genes can be reliably genotyped using HTS, provided that there is sufficient per amplicon ...

Testing genotyping strategies for ultra-deep sequencing of a co ...

Request PDF | Testing genotyping strategies for ultra-deep sequencing of a co-amplifying gene family: MHC class I in a passerine bird | Characterisation of ...

Testing genotyping strategies for ultra-deep sequencing of a co ...

LUND UNIVERSITY LIBRARIES · Testing genotyping strategies for ultra-deep sequencing of a co-amplifying gene family : MHC class I in a passerine bird · Links.

Testing genotyping strategies for ultra‐deep sequencing of a co ...

AbstractCharacterization of highly duplicated genes, such as genes of the major histocompatibility complex (MHC), where multiple loci often co‐amplify, ...

Testing genotyping strategies for ultra-deep sequencing of a co ...

Dive into the research topics of 'Testing genotyping strategies for ultra-deep sequencing of a co-amplifying gene family: MHC class I in a passerine bird'.

A new hybrid approach for MHC genotyping: high-throughput NGS ...

Our results suggest that an amplicon-based NGS approach coupled with single-molecule MinION nanopore sequencing can efficiently achieve both the ...

Sequence-based genotyping methods - Illumina

Genotyping by sequencing, or next-generation genotyping, is a genetic screening method for discovering novel plant and animal SNPs and performing genotyping ...

Ultra-deep sequencing enables high-fidelity recovery of biodiversity ...

Next-generation-sequencing (NGS) technologies combined with a classic DNA barcoding approach have enabled fast and credible measurement for biodiversity of ...

Genotyping Technique - an overview | ScienceDirect Topics

There are more sensitive tests that are able to detect minority quasispecies: single genome sequencing, ultrasensitive allele specific PCR and ultra-deep ...

Ultra-deep next-generation sequencing of plasma cell-free DNA in ...

Clinical sensitivity and specificity for plasma detection of known oncogenic drivers were calculated and compared with tissue genotyping results. Orthogonal ...

Deep Sequencing - Illumina

Ultra-deep sequencing of PCR amplicons enables analysis of specific genomic regions of interest. Learn more about amplicon sequencing and find comprehensive ...

Resistance testing: genotype | Johns Hopkins HIV Guide

Important considerations · Deep sequencing of V3 loop of HIV gp120 used to predict co-receptor tropism. · Next generation sequencing may improve ...

Ultra-deep sequencing validates safety of CRISPR/Cas9 genome ...

To perform ultra-deep sequencing of tumor suppressors and oncogenes, we used a hybrid-capture NGS assay for detection of DNA variants at high ...

Detection of ultra-rare mutations by next-generation sequencing

The advent of massively parallel DNA sequencing has ushered in a new era of genomic exploration by making simultaneous genotyping of hundreds of ...

High-Throughput Genotyping | CRISPR Validation - Genewiz

High-throughput genotyping is a next generation sequencing (NGS)-based assay ideal for ultra-sensitive, high-throughput, sample-to-answer genotyping projects.

Testing genotyping strategies for ultra-deep sequencing of a co ...

Testing genotyping strategies for ultra-deep sequencing of a co-amplifying gene family: MHC class I in a passerine bird. Biedrzycka, A. Sebastian, A ...

A novel workflow to improve multi-locus genotyping of wildlife species

Testing genotyping strategies for ultra-deep sequencing of a co-amplifying gene family: MHC class I in a passerine bird. Molecular Ecology ...