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Winsorization greatly reduces false positives by popular differential ...


Winsorization greatly reduces false positives by popular differential ...

As expected, winsorization greatly reduced the number of DEGs on the permuted datasets (Fig. 1A) and the percentage of permuted datasets with ...

Winsorization greatly reduces false positives by popular differential ...

Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples · Abstract.

(PDF) Winsorization greatly reduces false positives by popular ...

PDF | A recent study found severely inflated type I error rates for DESeq2 and edgeR, two dominant tools used for differential expression ...

Response to "Neglecting normalization impact in semi-synthetic ...

... positives" and "Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples ...

Response to Neglecting normalization impact in semi-synthetic RNA ...

... false positives and Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples. 2024.

Winsorization greatly reduces false positives by popular differential ...

Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples · Related Search.

The Biostar Herald for Monday, November 04, 2024

Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples | Genome ...

Response to "Neglecting normalization impact in semi-synthetic ...

Yang L, Zhang X, Chen J: Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples. 2023.

Research - Xianyang Zhang

L Yang, X Zhang, J Chen. Winsorization Greatly Reduces False Positives by Popular Differential Expression Methods when Analyzing Human Population Samples .

Exaggerated false positives by popular differential expression ...

It is important because it can cope with zero count which is common in lower replicate count experiments. ... greatly across groups/experiments..

dearseq: a variance component score test for RNA-seq differential ...

A phenomenon by permutation analysis is found: two popular ... Winsorization greatly reduces false positives by popular differential expression methods when ...

UC Irvine - eScholarship

... false positives and Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples. Ge ...

OpenURL Connection Search - EBSCO

... false positives" and "Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples".

Per-sample standardization and asymmetric winsorization lead to ...

The effect of reducing the contribution of lowly expressed genes, and of the winsorization for the highly expressed ones, is made explicit by comparing the ...

Publications | The Junction of Statistics and Biology - UCLA

... false positives" and "Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples".

A large-scale whole-genome sequencing analysis reveals highly ...

... false positives" and "Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples".

Evaluation of statistical methods for normalization and differential ...

Langmead B, Trapnell C, Pop ... Winsorization greatly reduces false positives by popular differential expression methods when analyzing human population samples".

Benchmarking and building DNA binding affinity models using allele ...

Boris P Hejblum ... Denis Agniel. 30 Oct 2024. Save. Winsorization greatly reduces false positives by popular differential expression methods when analyzing ...

EdgeR glmLRT vs glmQLFTest

So I trust glmQLFTest much more to control the false positive rate. ... I am comparing differential gene expression (using glmQLFTest) and ...

A large-sample crisis? Exaggerated false positives by popular ...

Exaggerated false positives by popular differential expression methods ... lower than that of the Wilcoxon rank-sum test, a classic ...