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a new methodology to deal with artefacts and allelic dropout


a new methodology to deal with artefacts and allelic dropout - PubMed

MHC genotyping of non-model organisms using next-generation sequencing: a new methodology to deal with artefacts and allelic dropout. BMC Genomics. 2013 Aug ...

MHC genotyping of non-model organisms using next ... - Gale

... a new methodology to deal with artefacts and allelic dropout. Citation ... artefact identification workflow: pathway for identification of artefacts and putative ...

MHC genotyping of non-model organisms using next-generation ...

... allele calling to distinguish true alleles from artefacts are required ... a new methodology to deal with artefacts and allelic dropout. Authors. Sommer ...

MHC genotyping of non-model organisms using next-generation ...

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Risk of Misdiagnosis Due to Allele Dropout and False-Positive PCR ...

In the case of genotyping assays, artifacts such as allele dropout represent a risk of misdiagnosis for amplification-based methods. However, its frequency of ...

‪Alexandre Courtiol‬ - ‪Google 学术搜索‬ - Google Scholar

MHC genotyping of non-model organisms using next-generation sequencing: a new methodology to deal with artefacts and allelic dropout. S Sommer, A Courtiol, CJ ...

Analysis of amplicon-based NGS data from neurological disease ...

MHC genotyping of non-model organisms using next-generation sequencing: a new methodology to deal with artefacts and allelic dropout. BMC ...

Dealing with allelic dropout when reporting the evidential value in ...

A method is suggested that allows the use of loci that have shown allelic dropout in kinship analysis as used for disaster victim identification (DVI) and ...

Allelic Dropout Is a Common Phenomenon That Reduces ... - Frontiers

Materials and Methods. We performed genetic testing on DNA samples from 232 patients diagnosed with inherited cardiomyopathies in clinical ...

Allele and artefact identification workflow - ResearchGate

... artefact identification workflow: pathway for identification of artefacts and putative alleles ... A new methodology to deal with artefacts and allelic dropout.

Impact of allelic dropout on evidential value of forensic DNA profiles ...

In this article, however, we present a method using nonsuspect-driven RMNE calculations taking allelic dropout into consideration. ... deal with allelic dropout ...

Removing the bad apples: A simple bioinformatic method to improve ...

In fact, allele dropout originating from these technical artefacts can sometimes exceed dropout ... method to mitigate allelic dropout ...

An efficient method for screening faecal DNA genotypes and ...

Allelic dropout occurs when one allele of a heterozygous locus does not amplify. (Taberlet et al. 1996). False alleles are artifacts of the. PCR process and can ...

Electrophoresis artefacts - The Laboratory of Ben Evans

... New York, NY 10027,. USA ... alleles'), sampling stochasticity ('allelic dropout') and amplification artefacts ('false alleles'), resulting in false.

Sequencing-induced artefacts in NGS STR data - EurekaMag

... a new methodology to deal with artefacts and allelic dropout Bmc Genomics 14: 542 · Yoshida, K.; Kobayashi, M.; Futagami, K.; Fujikoshi, Y. 1999: Statistical ...

Allelic drop-out and preferential amplification in single cells and ...

We investigated an improved method of diagnosing sex and cystic fibrosis ... a new technology (fluorescent PCR) to determine the base level of PCR artefacts ...

Risk of Misdiagnosis Due to Allele Dropout and False-Positive PCR ...

2022. TLDR. A novel intronic variant identified with RNA analysis and an allele dropout ... 2006. TLDR. The best method to identify allelic dropout was the ...

Automated artifact identification and contributor estimation for use ...

... allele sharing and/or allelic dropout accounted ... PACE artifact management and thresholding algorithms attempt to automate this process ...

MHC Genotyping by SSCP and Amplicon-Based NGS Approach in ...

MHC genotyping of non-model organisms using next-generation sequencing: A new methodology to deal with artefacts and allelic dropout. BMC Genomics, 14 ...

Analysis of amplicon-based NGS data from neurological disease ...

A procedure to manage allele drop-out artifacts in amplicon-based targeted re-sequencing, based on a pipeline composed of two steps of alignment and variant ...