shuxiaoc/maxfuse
Description. MaxFuse is a Python package for integrating single-cell datasets from different modalities with no overlapping features and/or under low signal-to- ...
Integration of spatial and single-cell data across modalities with ...
We have implemented MaxFuse as a Python package which is freely available to the public at https://github.com/shuxiaoc/maxfuse. Results ...
MaxFuse enables data integration across weakly linked spatial and ...
We developed MaxFuse to enable matching and integration between cells from modalities such as single-cell spatial proteomic datasets and single-cell ...
Nature Biotechnology on X: "@Wharton @StanfordMed @UWBiostat ...
Wharton @StanfordMed @UWBiostat @NancyZh60672287 @ZongmingMa @ShuxiaoC .@AkoyaBio deploys the MaxFuse algorithm for multiomic integration of ...
Integration of spatial and single-cell data across modalities with ...
We developed MaxFuse, a cross-modal data integration method that, through iterative co-embedding, data smoothing, and cell matching, leverages all information ...
maxfuse · Overview · Downloads · Search · Builds · Versions. Versions. latest. Repository. https://github.com/shuxiaoc/maxfuse.git. Project Slug. maxfuse. Last ...
... shuxiaoc/maxfuse…. Feedbacks and suggestions for improvements are appreciated as always! GitHub - shuxiaoc/maxfuse · From github.com · 12:35 PM ...
(PDF) Integration of spatial and single-cell data across modalities ...
public at https://github.com/shuxiaoc/maxfuse. Results. Cross-modality matching via iterative smoothed embedding. The input to MaxFuse are ...
View entries for individual tools - scRNA-tools
... MaxFuse. MaxFuse is a Python package for integrating single-cell datasets ... shuxiaoc/maxfuse. starsN/A. forksN/A. last commitUnknown. License: Custom ...
For Review Only - The Innovation
mapping include STvEA,68 Tangram,38 gimVI,69 and MaxFuse.70 STvEA ... https://github.com/shuxiaoc/maxfuse. Integrating. scRNA-seq data and SRT data.
shuxiaoc's profile | Read the Docs
shuxiaoc. Profile · Admin · maxfuse ( zongmingma bkzhu ) 3 months, 1 week ago. View Docs. Stay Updated. Blog. Sign up for our newsletter to get our latest blog ...
Organization of the human intestine at single-cell resolution. - Abstract
We have uploaded the code that we used to perform the MaxFuse matching for the snRNA-seq and CODEX datasets within the paper here (https://github.com/shuxiaoc/ ...
Spatial resolved transcriptomics: Computational insights into gene ...
... shuxiaoc/maxfuse. gimVI69. A deep genrative model for imputing missing genes in. spatial data by leveraging information from shared. genes in ...
... shuxiaoc/maxfuse. starsN/A. forksN/A. last commitUnknown. License: Custom; Categories: Integration; Added: 2023-09-15, Updated: 2023-09-15. MELD. MELD (Manifold ...
... shuxiaoc/maxfuse MaxFuse is a Python package for integrating single-cell datasets from different modalities with no overlapping features and/or under low ...
/ Excited to share our latest preprint led by @ShuxiaoC ... Feedbacks and suggestions for improvements are appreciated as always! GitHub - shuxiaoc/maxfuse.
maxfuse | Python package | Machine Learning library
gh repo clone shuxiaoc/maxfuse. sshUrl. [email protected]:shuxiaoc/maxfuse.git. Download. https://github.com/shuxiaoc/maxfuse/archive/refs/heads/master.zip
Akoya Biosciences Deploys the MaxFuse Algorithm Co-Developed ...
MaxFuse enables matching and integration of datasets from spatial proteomics, spatial transcriptomics, single-cell sequencing, or other modalities.
... [MaxFuse](https://github.com/shuxiaoc/maxfuse) - [scanpy](https://github.com/scverse/scanpy) Thanks for all their contributors and maintainers!
MaxFuse enables data integration across weakly linked spatial and ...
MaxFuse enables data integration across weakly linked spatial and single-cell modalities. Nat Biotechnol. 2024 Jul;42(7):1036-1037. doi: 10.1038/s41587-023 ...