Single‐marker and haplotype‐based genome‐wide association ...

(a) Genome region SSC7:97435001 bp in Italian Large White pigs and (b) genome region SSC15:134400001 bp in Italian Landrace pigs. Haplotypes ...

Haplotype-based association mapping complements SNP-based ...

The most commonly used genetic variants to test genotype-phenotype associations in GWAS are single nucleotide polymorphism (SNP) markers.

A Genome-Wide Association Study for Agronomic - ProQuest

... Markers and SNP-Based Haplotype Analysis ... association mapping panel using single nucleotide polymorphism (SNP) markers and haplotype information.

Haplotype-based genome wide association study using a ... - OUCI

... marker genotype data ofOryza sativasubsp.indica, and performed GWAS of the datasets. We compared the power of our method, the conventional single-SNP GWAS ...

Single Marker and Haplotype-Based Association Analysis of ... - Scite

However, because patterns of variation within genomes are inherited as blocks, clustering markers into haplotypes for genome-wide scans could be ...

Genome-wide association profile with single and haplotype-based...

... single and multiple marker association methods | Genome-wide association studies have successfully identified several loci underlying complex diseases in ...

Genome-wide association studies using single-nucleotide ...

Haplotype-based association testing offers several advantages over the standard "one-SNP-at-a-time" approach [1]. First, genome-wide haplotype ...

Exploiting single-marker and haplotype-based genome-wide ...

GWAS for the number of teats were carried out in more than 1000 Italian Duroc pigs. A QTL located on chromosome 7 (VRTN gene region) was identified.

[PDF] Performance of Single Nucleotide Polymorphisms versus ...

Genome-wide association studies (GWAS) may benefit from utilizing haplotype information for making marker-phenotype associations. Several rationales for ...

Haplotype-Based Single-Step GWAS for Yearling Temperament in ...

Bovo, Single-marker and haplotype-based genome-wide association studies for the number of teats in two heavy pig breeds, Anim. Genet., № 52, с. 440 https ...

Haplotype-Based Association Analysis via Variance-Components ...

performed a genomewide association analysis and reported 34 SNPs that have P values <.0001 on the basis of the single-SNP genotypic test with 2 df. They used ...

RAINBOWR: Reliable Association INference By Optimizing Weights ...

(2020) RAINBOW: Haplotype-based genome-wide association ... Genetic Merits Using Genome-Wide Dense Single Nucleotide Polymorphism Markers.

Genome-wide single-nucleotide polymorphism analysis defines ...

We have examined the arrangement (haplotype) of single-nucleotide polymorphisms across the genomes of eight inbred strains of mice.

Haplotype-based genome wide association study using a novel ...

The problem is closely related to the complex gene compositions comprising multiple alleles, such as haplotypes. Several single nucleotide ...

Haplotype-tagged SNPs improve genomic prediction accuracy for ...

To overcome this issue, we applied two pre-selection methods for SNP markers viz. LD-based haplotype-tagging and GWAS-based trait-linked marker ...

RAINBOW: Haplotype-based genome-wide association study using

Downloadable! Difficulty in detecting rare variants is one of the problems in conventional genome-wide association studies (GWAS).

SNP- and haplotype-based genome-wide association studies for ...

One of the methods to detect segregation of QTL that affect eco- nomically important traits is genome-wide linkage-based. QTL mapping in closed-line breeding ...

A Haplotype Containing Quantitative Trait Loci for SLC1A1 Gene ...

Dense genetic information on SLC1A1 markers from different ethnicities and geographic locations will increasingly become available from genome-wide association ...

Genome-wide association studies using haplotypes and individual ...

associations between complex traits and markers. Genome-wide association studies (GWAS) based on either a single marker or haplotype have ...

Multiple haplotype-based analyses provide genetic and evolutionary ...

To date, most marker-trait associations have been revealed using QTL and genome-wide association studies (GWAS), demonstrating both their ...