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a S4 class for data with hierarchical structure


a S4 class for data with hierarchical structure - PubMed

Data organized into hierarchical structures (e.g., phylogenies or cell types) arises in several biological fields.

TreeSummarizedExperiment: a S4 class for data... - F1000Research

Read the original article in full on F1000Research: TreeSummarizedExperiment: a S4 class for data with hierarchical structure.

TreeSummarizedExperiment: a S4 class for data with hierarchical ...

TreeSummarizedExperiment: a S4 class for data with hierarchical structure [version 2; peer review: 3 approved]. Ruizhu Huang, Charlotte Soneson, Felix G.M. ...

a S4 class for data with hierarchical structure [version 2; peer review ...

We present TreeSummarizedExperiment, a R/S4 class that extends the commonly used SingleCellExperiment class by incorporating tree representations of rows and/ ...

TreeSummarizedExperiment: a S4 class for data with hierarchical ...

Download PDF 'TreeSummarizedExperiment: a S4 class for data with hierarchical structure'. Preview. Content: Published Version; Licence: Creative Commons: ...

a S4 class for data with hierarchical structure - Semantic Scholar

TreeSummarizedExperiment is presented, a R/S4 class that extends the commonly used SingleCellExperiment class by incorporating tree representations of rows ...

TreeSummarizedExperiment: a S4 class for data with hierarchical ...

Data organized into hierarchical structures (e.g., phylogenies or cell types) arises in several biological fields. It is therefore of interest to have data ...

TreeSummarizedExperiment: a S4 class for data with hierarchical ...

The former supports the information pertaining to the hierarchical structure that is available as the phylo class (e.g., phylogenetic tree), and the latter is ...

TreeSummarizedExperiment: a S4 Class for Data with Tree Structures

Description TreeSummarizedExperiment has extended SingleCellExperiment to include hierarchical information on the rows or columns of the rectangular data.

TreeSummarizedExperiment - Bioconductor

TreeSummarizedExperiment: a S4 Class for Data with Tree Structures ... TreeSummarizedExperiment has extended SingleCellExperiment to include hierarchical ...

Orchestrating Microbiome Analysis - 23 Resources

Huang, Ruizhu, Charlotte Soneson, Felix G. M. Ernst, et al. 2021. “TreeSummarizedExperiment: A S4 Class for Data with Hierarchical Structure [Version 2; Peer ...

Class Hierarchy | SAP Help Portal

You can set up your classification system as a hierarchical structure, to help you target your searches for objects.

15 S4 - Advanced R

Additionally, S4 provides both multiple inheritance (i.e. a class can have multiple parents) and multiple dispatch (i.e. method dispatch can use the class of ...

View() for S4 class extending data.frame - Stack Overflow

... data.frame(x=1:5, y=6:10), info="someInfo") #This doesn't show the tabular structure but looks like calling View() on a list View(d) #What I ...

reconsider S4 class hierarchy · Issue #156 · rcastelo/GSVA - GitHub

Along with the new object-oriented API a class union GsvaExprData was created for storing various expression data objects within parameter ...

S4 object system - Advanced R. - Hadley Wickham

formal class definitions: unlike S3, S4 formally defines the representation and inheritance for each class · multiple dispatch: the generic function can be ...

S4 Classes and Methods Acknowledgements Overview Introduction

that class. Friedrich Leisch: S4 Classes and Methods. useR! 2004, Vienna, Austria. Inheritance. • The hierarchical structure of classes we have seen for pixmap.

16.2. S4 Classes — R Tutorial - Cyclismo.org

The S4 approach differs from the S3 approach to creating a class in that it is a more rigid definition. The idea is that an object is created using the setClass ...

Working with Hierarchies in ABAP SQL - SAP Community

From the parent-child relationship and the actual data of the data source, the SQL hierarchy consisting of parent nodes and child nodes can be ...

R Package distrMod: S4 Classes and Methods for Probability Models

Estimation by MDE or MLE is straightfor- ward: We define an object of class NormLocationFamily and generate some data. ... In the S4-inheritance structure for ...